Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015940173.1_cds_XP_016484499.1_75501
CDS Infomation

[gene=LOC107805038] [db_xref=GeneID:107805038] [protein=hydroxymethylglutaryl-CoA synthase-like] [protein_id=XP_016484499.1] [location=join(17232..17303,18773..18879,19242..19374,19661..19804,19915..20073,20216..20289,20372..20447,20540..20595,20687..20774,20892..21032,21126..21275,21384..21572)] [gbkey=CDS]
Sequence

ATGGCAGCTCAACCGAAGAATGTCGGAATTCTCGCCGTCGAAATTTACTTCCCTCCTACT
TGCCTCCCACAGGAAGCATTGGAGGCTCATGATGGAGCAAGCAAAGGAAAATACACAATC
GGTCTTGGACAAGATTGTATGGGCTTTTGCACTGAGGTTGAAGATGTTATATCTATGAGT
TTGACAGCAGTTACTTCCCTTCTGGAGAAGTATGAGATTGATCCTAAGCAAATTGGTCGT
CTCGAGGTTGGAAGTGAGACTGTGATTGATAAGAGCAAATCCATCAAAACATTCCTCATG
CAAATATTTGAGAAATGTGGAAATACTGACATTGAAGGAGTCGACTCAACTAATGCATGT
TATGGCGGAACTGCTGCATTGTTCAACTGCGTGAATTGGGTCGAGAGCTCTTCATGGGAT
GGGCGCTATGGACTTGTTGTATGCACTGACAGTGCGGTCTATGCTGAGGGAGCTGCTCGG
CCAACTGGAGGAGCTGCAGCAATTGCTATGCTAGTAGGACCAGATGCTCCTATTGTATTC
GAAAGCAAGATTAGAGCTAGCCATATGGCCCATGTCTATGATTTTTACAAGCCCATCCTC
GACAGTGAATATCCAGTGGTTGATGGAAAGCTTTCACAAACTTGTTATCTTATGGCACTT
GATTCCTGCTACAAGAGCTTATGCGACAAATATGAAAAATTGGAAGGCAAGCAGTTTTCA
ATTGACGATGCAGCCTATTTTGTTTTCCATTCACCATACAACAAGCTAGTACAGAAGAGC
ACTGCTCGATTGATGTTCAACGACTTTACAAGAAATGCTAGTTCCATTGATGAGTCCACC
AAAGAAAAACTTGCACCATTTTCATCCTTAGTTGGTGATGAAAGTTATCAAAGCCGTGAT
CTTGAGAAGGTATCCTGGCAAGTGGCAAAACCATTTTACGATGAGAAGGTGAAACCGGCC
ACGTTAATACCAAAACAAGTTGGCAACATGTACACCGCGTCTCTCTATGCTGCTTTTGCC
TCCCTCCTTCACAATAAGCACAGCTCATTGGCTGGACAGCGAGTAATCTTGTTCTCTTAC
GGAAGTGGATTGACTGCAACAATGTTCTCATTAAGGCTTAACGAAGGTCAACAACCTTTT
AGCTTGTCAAACATCGCAGCTGTTATGAACGTTGATGAGAAATTGAAGTCGAGACATGAG
TTCACTCCTGAAAAATTCATTGAAACGATGCATATAATGGAGCACAGATATGGTGGTAAG
GACTTTGTGACAACCAAGGATTGCAGCCTCTTAGCACCGGGTACCTACTACCTCACAGAA
GTCGATTCGAAGTACAGAAGATTTTATGCCCAAAAATGTGTTGAGAATGGACTTGCCAAT
GGTCACTGA

Peptide Sequence

PEP ID

XP_016484499.1
PEP Infomation

PREDICTED: hydroxymethylglutaryl-CoA synthase-like [Nicotiana tabacum]
Sequence

MAAQPKNVGILAVEIYFPPTCLPQEALEAHDGASKGKYTIGLGQDCMGFCTEVEDVISMS
LTAVTSLLEKYEIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKCGNTDIEGVDSTNAC
YGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGAARPTGGAAAIAMLVGPDAPIVF
ESKIRASHMAHVYDFYKPILDSEYPVVDGKLSQTCYLMALDSCYKSLCDKYEKLEGKQFS
IDDAAYFVFHSPYNKLVQKSTARLMFNDFTRNASSIDESTKEKLAPFSSLVGDESYQSRD
LEKVSWQVAKPFYDEKVKPATLIPKQVGNMYTASLYAAFASLLHNKHSSLAGQRVILFSY
GSGLTATMFSLRLNEGQQPFSLSNIAAVMNVDEKLKSRHEFTPEKFIETMHIMEHRYGGK
DFVTTKDCSLLAPGTYYLTEVDSKYRRFYAQKCVENGLANGH

Transcript Sequence

Gene sequence data has not been registered.